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GTCCAGATCATTTTTCACAGAGATTATCGCTTCAATCTCAGACATAAAATTTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagctttattattccaaaacccatgcttctgtcaataaagcttttctgagtattttggatggagttactctaaatttattgaattgaactccat...
species | Glycine max |
transcript | GLYMA08G20830.4 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|14990248|gb|BI315921.1|BI315921
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|207767896|gb|GD740308.1|GD740308
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|208333147|gb|GE128194.1|GE128194
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|208073582|gb|GD869431.1|GD869431
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|207842807|gb|GD817319.1|GD817319
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TGGGAAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCATEST: gi|254342009|gb|GR853146.1|GR853146
genomic: TGGG-AAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
EST: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAG TTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
genomic: TTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagc ... tgtttttcagTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACGTTCCAGGTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCCAGATCATTTTTCACAGAGATTATCGCTTCAATCTCAGACATAAAATTTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACCTTAAAGgttttagagctttattattccaaaacccatgcttctgtcaataaagcttttctgagtattttggatggagttactctaaatttattgaattgaactccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA