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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTTTATTAGCTGATGAAAGTTGTAGCACAGAAGGCAGGATTTTCAGTTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGgtatatcgattgtgatgacgtatttgaaactattcttatttcattttccttgaattagattatgctgtaaaaatgttaactcatgttgctcttgttttattcttag

Basic information

species Glycine max
transcript GLYMA06G41600.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26057105|gb|CA800019.1|CA800019
EST:     TCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATG                         GCCAAAAACATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCAC
genomic: TCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGgtatatcgat ... ttattcttagGCCAAAAACATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCAC
EST: gi|7591541|gb|AW707272.1|AW707272
EST:     TCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATG                         GCCAAAAACATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCAC
genomic: TCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGgtatatcgat ... ttattcttagGCCAAAAACATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCAC