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GCAAAGGATCAGTTATTTTGTCTTCTAGGACCCAATGGAGCTGGAAAAACTACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactctctttctgtgtctgttgttaactactacattgaacattcattaatcaaaattacaatagtcaacaagagtatgttaacattttcaatttctttaacag
species | Glycine max |
transcript | GLYMA06G20360.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|207811436|gb|GD783483.1|GD783483
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|254338644|gb|GR849955.1|GR849955
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|15662847|gb|BI700218.1|BI700218
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|208271111|gb|GE066619.1|GE066619
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|193518779|gb|FK472752.1|FK472752
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: GCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|208188811|gb|GD981829.1|GD981829
genomic: GCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCEST: gi|23062967|gb|BU578537.1|BU578537
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
EST: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATG CGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
genomic: TACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactct ... tctttaacagCGTTGATTTATGGGCATTCAATCAGAAGTTCTACTGGCATGTCAAACATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAAGGATCAGTTATTTTGTCTTCTAGGACCCAATGGAGCTGGAAAAACTACAGCTATTAATTGCTTGACAGGGGTAACTCCAGTAACTGATGGAGATGgtgatactctctttctgtgtctgttgttaactactacattgaacattcattaatcaaaattacaatagtcaacaagagtatgttaacattttcaatttctttaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG