1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTTTATTTCCCTACCATGCTGAGTCTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAGgtttgtgacttgcctgagtctatagttacagctttttttttttaaggaatctctttactttcctcaggaaaagtgctttatatttggattgtttttcggg...
species | Glycine max |
transcript | GLYMA06G01120.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAG GTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGGEST: gi|193363232|gb|FK328324.1|FK328324
genomic: AGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAGgtttgtgact ... attgacacagGTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGG
EST: ATTATATTGTCA-TCGAAAG GTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAAGCAGGTTGEST: gi|151405314|gb|EV275128.1|EV275128
genomic: ATTATATTGTCATTCGAAAGgtttgtgact ... attgacacagGTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGG-AAAGCAGGTTG
EST: CTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAG GTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGGEST: gi|4288840|gb|AI441390.1|AI441390
genomic: CTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAGgtttgtgact ... attgacacagGTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGG
EST: CTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAG GTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGG
genomic: CTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAGgtttgtgact ... attgacacagGTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTATTTCCCTACCATGCTGAGTCTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTCATTCGAAAGgtttgtgacttgcctgagtctatagttacagctttttttttttaaggaatctctttactttcctcaggaaaagtgctttatatttggattgtttttcggg
- - - - - - - - - - - - CTGAAG