1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGAATTTGATGAGGAAGGAAAGGTTGTTGGTGTTACATCTGAAGGGGAAACTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaaccaacctctagtttcactatttacaacccgttcaggtgatggtgagagtgaaaaattgcttgcttctaaagtctaggagtcatgctatgt...
species | Glycine max |
transcript | GLYMA05G30140.3 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAACCATCATGAGCCACCCAEST: gi|207819023|gb|GD790399.1|GD790399
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCAEST: gi|192313374|gb|FK005146.1|FK005146
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAAGTTGGEST: gi|193656048|gb|FK606678.1|FK606678
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGG
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCAEST: gi|6915949|gb|AW397479.1|AW397479
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCA
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTANGGTTGCAAGGGCGATAGCCATCATGAGCCACCCAEST: gi|208156728|gb|GD957262.1|GD957262
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
EST: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCAEST: gi|208226200|gb|GE025527.1|GE025527
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
EST: CTGCAAAGTGT-AAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAG GTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
genomic: CTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaa ... atttcaacagGTGAGGAAGGTTGGTAGGGTTGCAAGGGCGATAGCCATCATGAGCCACCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAATTTGATGAGGAAGGAAAGGTTGTTGGTGTTACATCTGAAGGGGAAACTGCAAAGTGTAAAAAAGTTGTTTGTGATCCATCATATTTGCCTGGCAAGgtattagaaaccaacctctagtttcactatttacaacccgttcaggtgatggtgagagtgaaaaattgcttgcttctaaagtctaggagtcatgctatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG