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ATGGCTGCAAAGATTTTGGCATGCTTTCTTGTGGTGATCTTGGTTTGGGAAATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgatatatttaacttgtacttatctgttattagtttaacttttagttatgttcattttgatgtgactcttcttaccaagtactcgcatttgctgt...
species | Glycine max |
transcript | GLYMA05G25780.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTTTGGACGCCCTATTTGC-TTATTTTTGG GTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATTEST: gi|24136282|gb|BU926792.1|BU926792
genomic: TTTTGGA-GCCC-ATTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
EST: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGG GTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATTEST: gi|193338485|gb|FK303412.1|FK303412
genomic: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
EST: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGG GTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATTEST: gi|208161302|gb|GD963476.1|GD963476
genomic: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
EST: TTTGCTTTATTTTTGG GTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATTEST: gi|208321022|gb|GE123849.1|GE123849
genomic: TTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
EST: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGG GTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAAEST: gi|208215598|gb|GE015525.1|GE015525
genomic: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAA
EST: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGG GTTATACTGANCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
genomic: AATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgata ... tatgtggcagGTTATACTGATCCTGCAAAGCCTGATCTCCCTCGAATGCATGAGTGGCATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGCTGCAAAGATTTTGGCATGCTTTCTTGTGGTGATCTTGGTTTGGGAAATCCCTGGATTCTTTGACATATTTTGGAGCCCATTTGCTTTATTTTTGGgtgagtgatatatttaacttgtacttatctgttattagtttaacttttagttatgttcattttgatgtgactcttcttaccaagtactcgcatttgctgt
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