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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTAAAGTGGGTGCAAGGACCTGCTCATGGCATGTACCAGTATTTCATAAAGgttggtagttggtactatcagggacatattcctaattagagattttgtttgcgtgtcaagttttttaactaattgatgttaaatccaactaatttattta...

Basic information

species Glycine max
transcript GLYMA05G24610.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12772634|gb|BG237488.1|BG237488
EST:     TAAGGTGGGTGCAAGGACCTACTCATGGCATGTACCAGTATTTCATAAAG                         GTGGTCCCTACAATATACACAGACATTAGAGGTCGTGTTATCCATTCAAAT
genomic: TAAAGTGGGTGCAAGGACCTGCTCATGGCATGTACCAGTATTTCATAAAGgttggtagtt ... cacattgcagGTGGTCCCTACAATATACACAGACATTAGAGGCCGTGTTATCCATTCAAAT
EST: gi|22929560|gb|BU546699.1|BU546699
EST:     TAAAGTGGGTGCAAGGACCTGNNCATGGCATGTACCAGTATTTCATAAAG                         GTGGTCNCTACAATATACACAGACATTAGAGGCCGTGTTATCCATTCAAAT
genomic: TAAAGTGGGTGCAAGGACCTGCTCATGGCATGTACCAGTATTTCATAAAGgttggtagtt ... cacattgcagGTGGTCCCTACAATATACACAGACATTAGAGGCCGTGTTATCCATTCAAAT
EST: gi|7233507|gb|AW568852.1|AW568852
EST:     GCAAGGACCTGCTCATGGCATGTACCAGTATTTCATAAAG                         GTGGTCCCTACAATATACACAGACATTAGAGGCCGTGTTATCCATTCAAAT
genomic: GCAAGGACCTGCTCATGGCATGTACCAGTATTTCATAAAGgttggtagtt ... cacattgcagGTGGTCCCTACAATATACACAGACATTAGAGGCCGTGTTATCCATTCAAAT