1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTATTAAGTATGTTCCAGTCCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagctaaatattttacattttgggatattgtgtattgtgtacctttgttagttctgttgaggtgtgaacttttgaaaagctgaatggattttgaa...
species | Glycine max |
transcript | GLYMA05G24530.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTEST: gi|7692866|gb|AW760965.1|AW760965
genomic: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
EST: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTEST: gi|19269653|gb|BM885909.1|BM885909
genomic: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
EST: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTEST: gi|9203491|gb|BE329715.1|BE329715
genomic: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
EST: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTEST: gi|15203579|gb|BI426347.1|BI426347
genomic: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
EST: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAG GTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
genomic: TTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagct ... tcttcaacagGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTAAGTATGTTCCAGTCCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTAGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGgtaacaagctaaatattttacattttgggatattgtgtattgtgtacctttgttagttctgttgaggtgtgaacttttgaaaagctgaatggattttgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC