1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCACTGCGTGCAGCTCTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttttacttgccatttctttttcttatctctttttctgtttatgccagcttgcattggaaattactgaagatttagtcagtgatggagatatgt...
species | Glycine max |
transcript | GLYMA04G42670.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|7691223|gb|AW759354.1|AW759354
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|208060750|gb|GD856686.1|GD856686
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|23057473|gb|BU578156.1|BU578156
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|208339448|gb|GE138566.1|GE138566
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTTTCNGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|17022525|gb|BM093559.1|BM093559
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCEST: gi|7693203|gb|AW761299.1|AW761299
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
EST: CTGGATGCTGAAGGCTNTCAGCATGTTTCTATAATGTCCTATACAGCAAA GTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAGACCC
genomic: CTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttt ... ttgccaacagGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCACTGCGTGCAGCTCTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAgtaagttttttacttgccatttctttttcttatctctttttctgtttatgccagcttgcattggaaattactgaagatttagtcagtgatggagatatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG