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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAACAATGCTGATAAAAAACAATATGAACTTGACCTAGGCCGCATTTTACGTGGGGATGACAACCGGACAACACTCATGATAAAAAATATTCCCAATAAgtatgccaattatctccatatcttttttgtgcatttttgctgcttatgctgttatcttctcatccttacttcaccaaagaatgtgattattagttaaata...

Basic information

species Glycine max
transcript GLYMA04G37810.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G37810.2 (Glycine max), 5'ss of exon 7
lower sequence: Vv17s0000g00240.t01 (Vitis vinifera), 5'ss of exon 11
ACAACAATGCTGATAAAAAACAATATGAACTTGACCTAGGCCGCATTTTACGTGGGGATGACAACCGGACAACACTCATGATAAAAAATATTCCCAATAAgtatgccaattatc-tccatatcttttttgtgcatttttgctgct--tatgctgttatcttctcatccttacttcaccaaagaatgtgattattagttaaata
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CCAACCATACTGATAAGAAACAGTATGAACTTGACATTGATCGTATATTACGTGGGGAAGACTGCCGAACGACACTGATGATAAAGAACATTCCCAACAAgtatgtgaataattgtccttgctgtttttaccttttctgtttgttgctacaatgtgattttgttacccctccttc-cctgaaacttcactatttaattatg--