1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CCCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttctgattattttctttgttgttactgctatgtctgccatagaaatatattaaatctgtcaagctccaatgcctagtgttatagttctgtcac...
species | Glycine max |
transcript | GLYMA03G38850.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAG GTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTACEST: gi|17519874|gb|BM188916.1|BM188916
genomic: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTAC
EST: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAG GTTCTGGGAACTCCAACAAGGEST: gi|15285595|gb|BI469486.1|BI469486
genomic: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGG
EST: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAG GTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTACEST: gi|21888144|gb|BQ741366.1|BQ741366
genomic: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTAC
EST: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAG GTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTACEST: gi|22931093|gb|BU548232.1|BU548232
genomic: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTAC
EST: AGTTGATCAGCTTGTTGAGATCATCAAN NNNCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTACEST: gi|208199154|gb|GD999479.1|GD999479
genomic: AGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTGCATGAATCCTAACTAC
EST: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAG GTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTG
genomic: CCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttc ... gctttggtagGTTCTGGGAACTCCAACAAGGGAAGAGATAAAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGgtaatctttctgattattttctttgttgttactgctatgtctgccatagaaatatattaaatctgtcaagctccaatgcctagtgttatagttctgtcac
- - - - - - - - - AGTGGA
- - - - - - - - - GTGGAG
- - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - AGATCA