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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAACTACAAAATTCCTACATTGGACACTATTCCTCAAAAGTTTAATGTTCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacatagtaatgctcaaaactaaattataagtattaaactatgtctgtgtttttactatcagtgcaagaactatttcttcatatgaatactgttat...

Basic information

species Glycine max
transcript GLYMA02G44000.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14999182|gb|BI320245.1|BI320245
EST:     TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGG                         CTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
genomic: TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacata ... atttgtgcagCTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
EST: gi|31462286|gb|CD404314.1|CD404314
EST:     TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGG                         CTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
genomic: TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacata ... atttgtgcagCTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
EST: gi|209726566|gb|BW666484.1|BW666484
EST:     TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGG                         CTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
genomic: TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacata ... atttgtgcagCTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
EST: gi|105634738|gb|DW247651.1|DW247651
EST:     TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGG                         CTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
genomic: TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacata ... atttgtgcagCTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
EST: gi|13252806|gb|BG363709.1|BG363709
EST:     TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGG                         CTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA
genomic: TCAAATCCTCAACAGTGAACACCACCAACAACGTGTTCTCTCTTCAAAGGgtacgacata ... atttgtgcagCTTCCGGTGAACCACCACTACTTCTAGCAGCTTCTGTTCACTGTGCAACAA