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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATATTACATCTTCCAGTTCATTAATGTATTTCTTGGGAGCATAATTACTGGGACTGCATTCCAACAGCTAGATAAATTTATCCATCAGTCAGCAAATGAgtaagaaagtcctcctagtctagtatatgcactactatctattacaattattaagcatctgtaagtatagaagacattacaaattttaagaaatgcattt...

Basic information

species Glycine max
transcript GLYMA02G43910.2
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G43910.2 (Glycine max), 5'ss of exon 9
lower sequence: Vv12s0059g01090.t01 (Vitis vinifera), 5'ss of exon 8
GATATTACATCTTCCAGTTCATTAATGTATTTCTTGGGAGCATAATTACTGGGACTGCATTCCAACAGCTAGATAAATTTATCCATCAGTCAGCAAATGAgtaagaaagtcctcctagtcta-gta-tatgcactac-tatctattacaattattaagcatctgtaagtatagaagaca--ttacaaattttaagaaatgcattt
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GATTTTATATATTCCAATTTATTAATGTTTTTCTTGGGAGCATAATCACTGGAACTGCATTTCAACAATTAAATAGTTTTATCCACCAGTCTGCAAATGAgt----aagttcttctcatatatgcactgtgcattatatttctgagacatctcttaggtttttggaaatgcaatcttcaaataatcattatcgatgcatgtatt-