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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTCTACCAAGACTAGTGGATTCACCGAGTTTGAAAAATTTGCATGCTAAGAATATATCTTGCGGTGCTCGCCACACTGCTTTAGTAACAGgtataccatcctatagacctgcttatgtcattttcagagctgccttgtcaatttaggcttccattattgaagacatttaatgacaacggtgctagtaaaa...

Basic information

species Glycine max
transcript GLYMA02G41810.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6963782|gb|AW432475.1|AW432475
EST:     CTGCTTTAGTAACAG                         AGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG
genomic: CTGCTTTAGTAACAGgtataccatc ... gttcttcaagAGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG
EST: gi|208269254|gb|GE066020.1|GE066020
EST:     GCATGCTAAGAATATATCTTGCGGTGCTCGCCACACTGCTTTAGTAACAG                         AGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG
genomic: GCATGCTAAGAATATATCTTGCGGTGCTCGCCACACTGCTTTAGTAACAGgtataccatc ... gttcttcaagAGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG
EST: gi|9985400|gb|BE659508.1|BE659508
EST:     CTGCTTTAGTAACAG                         AGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG
genomic: CTGCTTTAGTAACAGgtataccatc ... gttcttcaagAGGGCGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAG