1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTATGCTGTAATTCGCAAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcctcattatttacctattggtctcagattttgacagtccactggaaactctttatttgatgtcccgttctaccccattcatctgcacatgtga...
species | Glycine max |
transcript | GLYMA02G36960.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTTEST: gi|193534111|gb|FK490764.1|FK490764
genomic: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
EST: ACTCCTCATCATCTTGTAACTTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTTEST: gi|58021429|gb|CX708170.1|CX708170
genomic: ACTCCTCATCATC-TG-AAC-TCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
EST: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTTEST: gi|57575838|gb|CX548809.1|CX548809
genomic: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
EST: AAGGTTGAAAATGTCACCAACTCCTCATCATTTGAACTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTATTTCCAGGAATACAACTTEST: gi|58025341|gb|CX712082.1|CX712082
genomic: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
EST: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTTEST: gi|51338422|gb|CO982288.1|CO982288
genomic: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
EST: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAG GGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
genomic: AAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcct ... aattttccagGGCCATTATGTCCGTAATAACTTATAACGGTTACTTCCAGGAATACAACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATGCTGTAATTCGCAAGGTTGAAAATGTCACCAACTCCTCATCATCTGAACTCCTAGCTTGTAGgtgagtgcctcattatttacctattggtctcagattttgacagtccactggaaactctttatttgatgtcccgttctaccccattcatctgcacatgtga
- - - - - - - - - - - - - - - - - - CTCCTC