1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TGTGGTTTCAAGATGTTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttcttagatctctatagaaagcaataatttcttaaaatttgaaaggaaattgcttcataattccgaaataatagaaaactgattgttcttatt...
species | Glycine max |
transcript | GLYMA02G10150.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAG GTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTCEST: gi|58018091|gb|CX704833.1|CX704833
genomic: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttc ... ttctctgcagGTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTC
EST: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAG GTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTCEST: gi|10236267|gb|BE805155.1|BE805155
genomic: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttc ... ttctctgcagGTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTC
EST: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAG GTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAAGGATCTEST: gi|58014457|gb|CX701199.1|CX701199
genomic: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttc ... ttctctgcagGTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTA-GGATCT
EST: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAG GTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTC
genomic: TTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttc ... ttctctgcagGTGGTGCTTCGATGTTGAGTTAGTCTTTCTGTGCAAGTGGTTTAGGATCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGGTTTCAAGATGTTTACTAGGGCTGCAGCCAGGAAGCTTTTTTCAAATGTACGCCTAAAAAGgtgactgttcttagatctctatagaaagcaataatttcttaaaatttgaaaggaaattgcttcataattccgaaataatagaaaactgattgttcttatt
- - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatagaaa