1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTTTCAGCTCCTGGATGCACTTTTGTGCAGTGCGTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGgtagatatacccatctgtacaatagctttcaccttcattttttccttcaaatattttatctctgacccttgattcttgtggtcattccag
species | Glycine max |
transcript | GLYMA02G07260.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTG GCATGTGTTTTAGCCCCATCAGTCAAAGCAGAGAAGAAAGTACGCTCTATCEST: gi|6342008|gb|AW164832.1|AW164832
genomic: GTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGgtagatatac ... gtcattccagGCATGTGTTTTAGCCCCATCAGTCAAAGCAGAGAAGAAAGTACGCTCTATC
EST: GTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTG GCATGTGTTTTAGCCCCATCAGTCAAAGCAGAGAAGAAAGTACGCTCTATC
genomic: GTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGgtagatatac ... gtcattccagGCATGTGTTTTAGCCCCATCAGTCAAAGCAGAGAAGAAAGTACGCTCTATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTCAGCTCCTGGATGCACTTTTGTGCAGTGCGTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGgtagatatacccatctgtacaatagctttcaccttcattttttccttcaaatattttatctctgacccttgattcttgtggtcattccag
- - - - - - - - - - - - - - - - - - - - - - - AGAGCA