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GTCATATCTCCCAATGTATTTAACATGGAACTGTGGGTGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgtttttttcccatatttataaatgcttgtttgtgtaaaaatgtgggttggaggccatatctttttatcttgctggaatctaaatgaatcatatttg...
species | Glycine max |
transcript | GLYMA02G03750.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAG GTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCAACTGEST: gi|254320235|gb|GR829423.1|GR829423
genomic: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgttttt ... tgtgaactagGTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCA-CTG
EST: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAG GTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGCEST: gi|14258843|gb|BG881751.1|BG881751
genomic: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgttttt ... tgtgaactagGTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGC
EST: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAG GTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGCEST: gi|193548977|gb|FK505384.1|FK505384
genomic: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgttttt ... tgtgaactagGTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGC
EST: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAG GTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGC
genomic: TGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgttttt ... tgtgaactagGTTGACAAACAAGAGTTTGGGTTGAAACCAATGAATTGCCCAGGGCACTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATATCTCCCAATGTATTTAACATGGAACTGTGGGTGCAATCTGGTCATGCTGCAAATTATAGGGAGGATATGTTTATCTTAGAGgtatgtttttttcccatatttataaatgcttgtttgtgtaaaaatgtgggttggaggccatatctttttatcttgctggaatctaaatgaatcatatttg
- - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gggttgg