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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGCCGAATAATCTTAGAGgtaaattaatttttatcaatcaaactgttctatacaaaatctgagctaagaattagttttggatttgttaggctttacttggtgatggtatatctagtac...

Basic information

species Glycine max
transcript GLYMA01G38670.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G38670.1 (Glycine max), 5'ss of exon 9
lower sequence: Vv04s0023g00980.t01 (Vitis vinifera), 5'ss of exon 6
ATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGCCGAATAATCTTAGAGgtaaattaatttttatcaatcaaactgttctatacaaaatctgagctaagaattagttttggatttgttaggctttacttggtgatggtatat-ctagtac---
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ATACCTCTTTGATAATGACTATTCAGATGCAAAGGATATATATGGGAAACCCATGAGTGGCAGATTCCCATATGATGAAAAAGGACGGATTATCTTGGAGgtaa-tgaaatttattctactgaatcactctaaatttgataatattgaatgattgaacttttatt-gtt-gattacatctga-aatagtatgtgcttttgtaga