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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTCTGCCAGGAGTTTGCCTCAATCATGCACTTCAAGACTTAGCGCAAAACTCgtaagtttgtgaattatttttatctttcttcctctgcaattccttatttggtggtactaatacttctgatttctgaacaatattgtag

Basic information

species Glycine max
transcript GLYMA01G35480.3
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151394706|gb|EV264577.1|EV264577
EST:     CTGCCAGGAGTTTGCCTCAATCATGCACTTCAAGACTTAGCGCAAAACTC                         TGCTTTTTCCCACAATATTTGGTGTCACGCATTACTACACCAATCTTCTTT
genomic: CTGCCAGGAGTTTGCCTCAATCATGCACTTCAAGACTTAGCGCAAAACTCgtaagtttgt ... aatattgtagTGCTTTTTCCCACAATATTTGGTGTCACGCATTACTACACCAATCTTCTTT
EST: gi|7590316|gb|AW706071.1|AW706071
EST:     CTGCCAGGAGTTTGCCTCAATCATGCACTTCAAGACTTAGCGCAAAACTC                         TGCTTTTTCCCACAATATTTGGTGTCACGCATTACTACACCAATCTTCTTT
genomic: CTGCCAGGAGTTTGCCTCAATCATGCACTTCAAGACTTAGCGCAAAACTCgtaagtttgt ... aatattgtagTGCTTTTTCCCACAATATTTGGTGTCACGCATTACTACACCAATCTTCTTT