1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGGGTGTCTTTTCAGCAGTGGTCCGGGCAAAAGATCTTAAAAATAGTAATGGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggccttggtttgtgtgatattctcattaaaatttctgcttttagcatgcgtcccttatactcactattatattttgtatgtcattgtcatag
species | Glycine max |
transcript | GLYMA01G20810.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAAT GTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCEST: gi|208337370|gb|GE133114.1|GE133114
genomic: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggcc ... attgtcatagGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGC
EST: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAAT GTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCEST: gi|193341677|gb|FK305951.1|FK305951
genomic: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggcc ... attgtcatagGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGC
EST: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAAT GTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCEST: gi|207819887|gb|GD793307.1|GD793307
genomic: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggcc ... attgtcatagGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGC
EST: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAAT GTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCEST: gi|193406996|gb|FK375227.1|FK375227
genomic: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggcc ... attgtcatagGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGC
EST: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAAT GTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTG
genomic: GGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggcc ... attgtcatagGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGTGTCTTTTCAGCAGTGGTCCGGGCAAAAGATCTTAAAAATAGTAATGGTGAGCCCAGAGAAGTTGCCATAAAAATTATTCGTAGTAATGATACAATgtgagtggccttggtttgtgtgatattctcattaaaatttctgcttttagcatgcgtcccttatactcactattatattttgtatgtcattgtcatag
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