1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTTGCACCGGACAATGGCACGGGGATTTCCAGATCCCTGGATCAAATTCAGTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgtttctttgctctgagatccatttgtagataaatagtcaaagttaacgtaattggaggccttctggaagttatttgagatttacaacttttg...
species | Glycine max |
transcript | GLYMA19G44420.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAG ATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATTEST: gi|151400669|gb|EV270483.1|EV270483
genomic: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgt ... ttctatgcagATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATT
EST: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAG ATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATTEST: gi|208288823|gb|GE086628.1|GE086628
genomic: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgt ... ttctatgcagATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATT
EST: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTCGGGAG ATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATTEST: gi|208277120|gb|GE080791.1|GE080791
genomic: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgt ... ttctatgcagATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATT
EST: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAG ATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATT
genomic: GTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgt ... ttctatgcagATCTAGGAGCTCTAGGAAACTATCCTGGTTCACCATTTATGCAGTCTGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGCACCGGACAATGGCACGGGGATTTCCAGATCCCTGGATCAAATTCAGTGGAATTTTAGTCTATCTGACTTAACAGCAGATTTGTCAAACTTGGGAGgtaaattcgtttctttgctctgagatccatttgtagataaatagtcaaagttaacgtaattggaggccttctggaagttatttgagatttacaacttttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT