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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATCTAAAGGGAGCTGCTCTTGGTTGCTATGTCAAATCCTGTAGAAGAACGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCATgtactttctcatatcaatgctattatttttaaatttgcttaaaaaatacttgtgctttgcatttatctaaacttttctggggcattaactggttcag

Basic information

species Glycine max
transcript GLYMA19G35010.3
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193679047|gb|FK620219.1|FK620219
EST:     CTTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCAT                         GAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
genomic: CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCATgtactttctc ... actggttcagGAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
EST: gi|13478346|gb|BG507860.1|BG507860
EST:     CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCAT                         GAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
genomic: CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCATgtactttctc ... actggttcagGAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
EST: gi|4287407|gb|AI441185.1|AI441185
EST:     CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCAT                         GAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
genomic: CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCATgtactttctc ... actggttcagGAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
EST: gi|33388999|gb|CA852206.1|CA852206
EST:     CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCAT                         GAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT
genomic: CGTATCATGTTCCTTGTGCAATGGACATCTCAGATTGCCGTTGGGATCATgtactttctc ... actggttcagGAGGATTTTCTCTTGCTCTGTCCTGTCCATTCAAATGTCAAATTTCCATGT