1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATTAAACTACCTTTCGAAAAACTCATACATGCCTTGAAAAACTTTCCCGAGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAGgttctcttcctttctctggattttaattttttcacttaaaaaactgtgttatggactatgaatgatatgaattggagcaggatgcatgttttccttcact...
species | Glycine max |
transcript | GLYMA19G05360.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAG ATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGAEST: gi|8285412|gb|BE022971.1|BE022971
genomic: AGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAGgttctcttcc ... ttctcatcagATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGA
EST: TTATTCTATCAAG ATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGAEST: gi|18040193|gb|BM308487.1|BM308487
genomic: TTATTCTATCAAGgttctcttcc ... ttctcatcagATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGA
EST: AGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAG ATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGA
genomic: AGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAGgttctcttcc ... ttctcatcagATATCCAAGCGTTTAGAAGAATTGAAACAAGAGTATGAGAAGAAGAATGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTAAACTACCTTTCGAAAAACTCATACATGCCTTGAAAAACTTTCCCGAGGGTGCAATGAATCCGGATACATTGTTACCACTGGCTTATTCTATCAAGgttctcttcctttctctggattttaattttttcacttaaaaaactgtgttatggactatgaatgatatgaattggagcaggatgcatgttttccttcact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccttcac