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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGATGCTACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacattccggtttataatttaacagtatatatttaagaagatacaaaagtttaatgcagctgtgagaagcaagcccaggaaaaattgttcccaatt...

Basic information

species Glycine max
transcript GLYMA18G48610.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207729729|gb|GD707793.1|GD707793
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGTTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208304590|gb|GE104839.1|GE104839
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208100327|gb|GD898007.1|GD898007
EST:     CTTAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: C--AAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193672140|gb|FK616774.1|FK616774
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193440765|gb|FK409586.1|FK409586
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAAC
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAAC
EST: gi|208253436|gb|GE051144.1|GE051144
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGG
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGG
EST: gi|193614795|gb|FK561041.1|FK561041
EST:     AATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: AATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208276973|gb|GE073434.1|GE073434
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAA
EST: gi|8403151|gb|BE058785.1|BE058785
EST:     TACAGATGTTGAACAGGCTGTCATGGCAATGGCTGCTTCAGTCAAAGATA                         GAATGGCAAGCCAACCTGCAAACAAT
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAAT
EST: gi|208311328|gb|GE108592.1|GE108592
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208189348|gb|GD983668.1|GD983668
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193650993|gb|FK599364.1|FK599364
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|151404575|gb|EV274389.1|EV274389
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208296613|gb|GE089713.1|GE089713
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|192299109|gb|FG992870.1|FG992870
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAA-CA-TGCA-G-CCTCCA-CAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208137730|gb|GD933760.1|GD933760
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|254317320|gb|GR826265.1|GR826265
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208128640|gb|GD927520.1|GD927520
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193370231|gb|FK338109.1|FK338109
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|207825567|gb|GD800610.1|GD800610
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|207766361|gb|GD738717.1|GD738717
EST:     TGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCGAGGCCTCCAACAGTGCAGATCA
genomic: TGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193523207|gb|FK479104.1|FK479104
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193523596|gb|FK481831.1|FK481831
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|254317319|gb|GR826264.1|GR826264
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGGCCTCCAACAGTGCAGATC
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGG-CCTCCAACAGTGCAGATC
EST: gi|193424300|gb|FK386845.1|FK386845
EST:     CAAATGTTGAACAGGCTTTCTATTGGCAATGGCTGCTTCGATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAG
genomic: CAAATGTTGAACAGGCTTTC-AT-GGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAG
EST: gi|22524492|gb|BU083303.1|BU083303
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|207738253|gb|GD713707.1|GD713707
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208223565|gb|GE025286.1|GE025286
EST:     CTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCA
genomic: CTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCA
EST: gi|193614554|gb|FK563306.1|FK563306
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193591100|gb|FK545575.1|FK545575
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAGTGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193457696|gb|FK424988.1|FK424988
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACNGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193313343|gb|FK280012.1|FK280012
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGTTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208065297|gb|GD861715.1|GD861715
EST:     AATGGCTGCTTCAATCAAAGGATAA                         GAATGGTAAGCCAA
genomic: AATGGCTGCTTCAATCAA-GGATA-ggtatacatt ... tgtgaatgtaGAATGGCAAGCCAA
EST: gi|208065297|gb|GD861715.1|GD861715
EST:     AATGGCTGCTTCAATCAAAGGATAA                         GAATGGTAAGCCAA
genomic: AATGGCTGCTTCAATCAA-GGATA-ggtatacatt ... tgtgaatgtaGAATGGCAAGCCAA
EST: gi|208064216|gb|GD864736.1|GD864736
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208175880|gb|GD974713.1|GD974713
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208299936|gb|GE099715.1|GE099715
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGC-AGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|151407899|gb|EV277714.1|EV277714
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGAT
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGAT
EST: gi|208340539|gb|GE136219.1|GE136219
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|209719144|gb|BW662761.1|BW662761
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193698612|gb|FK634951.1|FK634951
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAA
EST: gi|207810399|gb|GD782461.1|GD782461
EST:     AATGGCTGCTTTCTAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: AATGGCTGC-TTC-AATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|192322414|gb|FK014895.1|FK014895
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGTAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193615746|gb|FK561959.1|FK561959
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|19346832|gb|BM891712.1|BM891712
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193434710|gb|FK403718.1|FK403718
EST:     AAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAA
genomic: AAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAA
EST: gi|208172677|gb|GD971996.1|GD971996
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCGAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|208049093|gb|GD844552.1|GD844552
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATCA
EST: gi|193427800|gb|FK394428.1|FK394428
EST:     TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATA                         GAATGGCAAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATC
genomic: TACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacatt ... tgtgaatgtaGAATGGC-AAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGCAGATC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGATGCTACAAATGTTGAACAGGCTTTCATGGCAATGGCTGCTTCAATCAAGGATAggtatacattccggtttataatttaacagtatatatttaagaagatacaaaagtttaatgcagctgtgagaagcaagcccaggaaaaattgttcccaatt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaat