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CACTGGCTGCGGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAGtaagtgtgcttaatccaaacttcattgacaatactcttatgtaactcccttttctgtttctttccaccatatttccttatttgaaaggttcattttcttt...
species | Glycine max |
transcript | GLYMA18G46610.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAT ACCCATTATATATCAAGTTAAEST: gi|192299097|gb|FG990411.1|FG990411
genomic: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAGtaagtgtgct ... ggtttccagtACCCATTATATATCAAGTTAA
EST: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAT ACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACEST: gi|254319562|gb|GR829074.1|GR829074
genomic: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAGtaagtgtgct ... ggtttccagtACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTAC
EST: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAT ACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACEST: gi|192295537|gb|FG988111.1|FG988111
genomic: GTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAGtaagtgtgct ... ggtttccagtACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTAC
EST: TTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGGATTTTAACAT ACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACEST: gi|192298436|gb|FG988452.1|FG988452
genomic: TTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGG-ATTTTAACAGtaagtgtgct ... ggtttccagtACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTAC
EST: TGTTCATAGCTTGCATGTCTATTTTCTTCTTGTTGGGGGGATTTTAACAT ACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGGAAGAGTTTTGCTA
genomic: TGTTCATAGCTTGCATGTCTATTTTCTTCTTGT-GGGGG-ATTTTAACAGtaagtgtgct ... ggtttccagtACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGG-AAGAGTTTTGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACTGGCTGCGGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACAGtaagtgtgcttaatccaaacttcattgacaatactcttatgtaactcccttttctgtttctttccaccatatttccttatttgaaaggttcattttcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctt