1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCTGATGGAAAAATTTTGGCTGCGACCCATGGCTCCACACTGCAGTGGTTATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaagcatccaccattttgatatttcctttaattgcaactgaaaaaacaagtaattttctatctgtgatcttcaactccttgattattttcttcacttgcag
species | Glycine max |
transcript | GLYMA18G45270.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATA GTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGGEST: gi|209718265|gb|BW677489.1|BW677489
genomic: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaa ... tcacttgcagGTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
EST: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATA GTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGGEST: gi|151410692|gb|EV280507.1|EV280507
genomic: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaa ... tcacttgcagGTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
EST: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATA GTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGGEST: gi|208065938|gb|GD865177.1|GD865177
genomic: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaa ... tcacttgcagGTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
EST: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATA GTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGGEST: gi|192319404|gb|FK005844.1|FK005844
genomic: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaa ... tcacttgcagGTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
EST: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATA GTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
genomic: ATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaa ... tcacttgcagGTGACATTTCATGCATTTCATGGGCTCCTAAACCCATTCCAATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGATGGAAAAATTTTGGCTGCGACCCATGGCTCCACACTGCAGTGGTTATGTGTTGAGACTGGAAAGGTTCTGGATACAGCTGAAAAAGCCCATGATAgtatgtccaagcatccaccattttgatatttcctttaattgcaactgaaaaaacaagtaattttctatctgtgatcttcaactccttgattattttcttcacttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA