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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTTTTGGCCTTCTATAAAGGTTTCCTACCTAATTTTGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAGtaagatatacatcttatcttggctatgctgtttgtgttatctttatattcttatgtaatttatatatcgtattacacctagttaacctcttacaaaatgt...

Basic information

species Glycine max
transcript GLYMA18G07540.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193440709|gb|FK405554.1|FK405554
EST:     TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAG                         CAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAG
genomic: TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAGtaagatatac ... atgtgacaggCAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAG
EST: gi|6482105|gb|AW201376.1|AW201376
EST:     TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAG                         CAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAGATTC
genomic: TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAGtaagatatac ... atgtgacaggCAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAGATTC
EST: gi|22928550|gb|BU545689.1|BU545689
EST:     TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAG                         CAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAGATTC
genomic: TGGTCGAGTGGGAATCTGGAATGTAATTTTGTTTCTTACCCTTGAACAAGtaagatatac ... atgtgacaggCAAAGAGAGCTGTAAGAGGATAATTCTTGTTTCTATTCATGATTAAGATTC