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AGCTAGTTGGATCAAGTAAGAGTGAAACTAGTTTACCTGGAATGGTGCTAAATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattttcactatgaactttatctatgcagttttatttctttcttgtgttttgtagagtaaattgaacattaaccttagcacaacggtaaggttgc...
species | Glycine max |
transcript | GLYMA18G02900.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAG TGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTAEST: gi|9900731|gb|BE609699.1|BE609699
genomic: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattt ... gattcactagTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTA
EST: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAG TGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTAEST: gi|10232947|gb|BE801835.1|BE801835
genomic: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattt ... gattcactagTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTA
EST: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAG TGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTAEST: gi|22540450|gb|BU090293.1|BU090293
genomic: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattt ... gattcactagTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTA
EST: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAG TGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTA
genomic: AATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattt ... gattcactagTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTAGTTGGATCAAGTAAGAGTGAAACTAGTTTACCTGGAATGGTGCTAAATACTAGAAAGCCAATAGTTTACACAGATCAGTTTGGAAGACGTCATAGgtatgtattttcactatgaactttatctatgcagttttatttctttcttgtgttttgtagagtaaattgaacattaaccttagcacaacggtaaggttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA