1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCTTTTTTCCTGCGTGCTGGCATTCTTCTTGAATTACTGTATTTTTCTGAACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgccttgcttgttgttttaccttgcatgaatagtgccccaagatttacaggttgtcagtgatgatgccataaggctttgactaagtgtaatca...
species | Glycine max |
transcript | GLYMA17G32030.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAG GATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTTEST: gi|22933439|gb|BU550578.1|BU550578
genomic: CTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgc ... tgatgtctagGATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTT
EST: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAG GATCTCTTTACTATTGGCCNNNGCTGGATAATTTTTGGTGGGCTACCATTTEST: gi|19270080|gb|BM886336.1|BM886336
genomic: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgc ... tgatgtctagGATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTT
EST: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAG GATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTTEST: gi|16105385|gb|BI893125.1|BI893125
genomic: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgc ... tgatgtctagGATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTT
EST: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAG GATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTTEST: gi|151397123|gb|EV266996.1|EV266996
genomic: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgc ... tgatgtctagGATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTT
EST: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAG GATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGACTACCATTT
genomic: ACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgc ... tgatgtctagGATCTCTTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTTTTTCCTGCGTGCTGGCATTCTTCTTGAATTACTGTATTTTTCTGAACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGgtatgtatgccttgcttgttgttttaccttgcatgaatagtgccccaagatttacaggttgtcagtgatgatgccataaggctttgactaagtgtaatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG