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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATTATTCCCTGTGCAGTACTGATACCCGGGCTATATTTCATTCCAGAATCTCCTAGATGGTTGgtatgaatcgtatacgaaataataataataataataataataataataataataataataataataattttccacttatattaatttgttacatcttttcttcgttttttttcctaatgtctag

Basic information

species Glycine max
transcript GLYMA16G25320.1
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G25320.1 (Glycine max), 5'ss of exon 8
lower sequence: LOC_Os05g49270.1 (Oryza sativa), 5'ss of exon 7
GAATTATTCCCTGTGCAGTACTGATACCCGGGCTATATTTCATTCCAGAATCTCCTAGATGGTTGgtatgaatcgt-atacgaaataataataataataataata-ataataataataataataataataataattttccacttatattaatttgttacatcttttcttcgttttttttcctaatgtctag
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GAATCTTGCCTTGCACTGTGTTGATACCTGGCCTATTCTTCATTCCAGAATCCCCAAGATGGTTGgtatgtattattgtatatgcaaaaaatcgatatgaaattacatcatctgaatcatttttttatagccatatttttatctctatatatctctag---------------------------------