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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTATTGACTTGGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTGgtaattataaactaaaattatattatatcaagtgtgaatctgttcttttttttaagaccatataccaatatttgcttgtaataaacacaaaagggcctaa...

Basic information

species Glycine max
transcript GLYMA16G19350.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21601604|gb|BQ611935.1|BQ611935
EST:     GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTG                         GTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG
genomic: GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTGgtaattataa ... gtttttgaagGTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG
EST: gi|10234037|gb|BE802925.1|BE802925
EST:     GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTG                         GTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG
genomic: GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTGgtaattataa ... gtttttgaagGTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG
EST: gi|7030141|gb|AW459924.1|AW459924
EST:     GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTG                         GTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG
genomic: GGCAACCTTGACTGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTGgtaattataa ... gtttttgaagGTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTG