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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGTTCGGTCGTGCTTGGCCCCTAAGAGCTCCTGTGAGAGATGGAATTGTACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgcatcactactatctaatcaatctatttttaccatttaaaatctacttcctagctatctattggttttaattgcttggttattgcataaagtt...

Basic information

species Glycine max
transcript GLYMA16G09320.2
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151408190|gb|EV277998.1|EV277998
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|13479098|gb|BG508441.1|BG508441
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|193717070|gb|FK654698.1|FK654698
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|57574399|gb|CX547374.1|CX547374
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|7589867|gb|AW705632.1|AW705632
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAATCAATGAAGCATTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|5606148|gb|AI900246.1|AI900246
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
EST: gi|57574752|gb|CX547727.1|CX547727
EST:     TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACG                         GACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA
genomic: TACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGgtatgttgca ... ttatctgtagGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCA