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ATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaacttccctctctagtctccatttctctccacttctgcaacttcccatatgactgtatttttagttggataaaaccaataaatattgattaagga...
species | Glycine max |
transcript | GLYMA16G08080.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAG TGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCACEST: gi|208102908|gb|GD900898.1|GD900898
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCAC
EST: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAG TGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGEST: gi|10237923|gb|BE806811.1|BE806811
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGG
EST: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAG TGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTTAG-TAGTCCAACCAEST: gi|207754685|gb|GD729308.1|GD729308
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCT-AGGTAGTCCAACCA
EST: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAG TGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAAEST: gi|26056243|gb|CA799157.1|CA799157
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAA
EST: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAG TGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCACEST: gi|10237927|gb|BE806815.1|BE806815
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCAC
EST: GCTATAATGGCTGAGTTGGTCACTCTGCGTCCTCTATTCCGCGGGAACAG GGAAGCAGATGAGATGTACAAAATATG
genomic: GCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaactt ... gtacatgcagTGAAGCAGATGAGATTTACAAAATATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGgtattaacttccctctctagtctccatttctctccacttctgcaacttcccatatgactgtatttttagttggataaaaccaataaatattgattaagga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggataaaa