1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAGGATGCTCAATCCACTTATCCACTTATGATGGAGGATGCACTTCCATACATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaatttgagctgtgaagttgatattattttattccacaacatgttttcaatatatttgttaattatcttcaagctctgactacatgttccattaataatttgttggcag
species | Glycine max |
transcript | GLYMA16G04760.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|6227837|gb|AW156436.1|AW156436
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|16349242|gb|BI974837.1|BI974837
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|31474171|gb|CD416199.1|CD416199
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|20207871|gb|BQ133960.1|BQ133960
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|214009522|gb|DB990108.1|DB990108
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|213594114|gb|DB981414.1|DB981414
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGEST: gi|31460932|gb|CD402960.1|CD402960
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
EST: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTG GCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
genomic: CATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaa ... ttgttggcagGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGATGCTCAATCCACTTATCCACTTATGATGGAGGATGCACTTCCATACATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGgtaggattaatttgagctgtgaagttgatattattttattccacaacatgttttcaatatatttgttaattatcttcaagctctgactacatgttccattaataatttgttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA