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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgctgagactgctgatctctgccttgttttcattgatcatgtgcctttcttttactgatcattatgctgttttcttcag

Basic information

species Glycine max
transcript GLYMA16G04240.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16347878|gb|BI973473.1|BI973473
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCTTAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|8284103|gb|BE021662.1|BE021662
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|16280509|gb|BI943999.1|BI943999
EST:     GTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: GTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|15202980|gb|BI425748.1|BI425748
EST:     GTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: GTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|17023962|gb|BM094996.1|BM094996
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|22523589|gb|BU082400.1|BU082400
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAGTTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTTAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|14258702|gb|BG881610.1|BG881610
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|4288308|gb|AI441314.1|AI441314
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|7591269|gb|AW707005.1|AW707005
EST:     CCTCAGACTGTATAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|16105053|gb|BI892793.1|BI892793
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|18041431|gb|BM309725.1|BM309725
EST:     ATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: ATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|254348827|gb|GR852506.1|GR852506
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|4313430|gb|AI460549.1|AI460549
EST:     TGAATTCAAGGCTAACAA                         GATCT-CGAGGAAGAGTATGT-AAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: TGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|23728244|gb|BU762169.1|BU762169
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|22521984|gb|BU080795.1|BU080795
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|9564613|gb|BE474122.1|BE474122
EST:     CCTCAGACTGTAGAACTGAGGAGGGT-CGCCGTGAATTCAAGGTTA-CAA                         AATCTCCAAG-AAGAG
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAG
EST: gi|193642594|gb|FK593320.1|FK593320
EST:     TAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: TAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|192333042|gb|FK024691.1|FK024691
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|20812366|gb|BQ296844.1|BQ296844
EST:     GGTACGCCGTGAGTTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTTAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: GGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|19348633|gb|BM893165.1|BM893165
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|192333296|gb|FK026177.1|FK026177
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|213615221|gb|DB965029.1|DB965029
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|12689966|gb|BG156302.1|BG156302
EST:     CCTCAGACTGTAGAACTGAGGAAGGTACGCCGTGAATTCAAG-CTGACAA                         GATCNTC-GAGGAAGAGTGTGTAA-GTCAATAAAGAAG-AAATGCGCAAA-
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATC-TCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAG
EST: gi|14125661|gb|BG790099.1|BG790099
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|6667321|gb|AW278772.1|AW278772
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|9258931|gb|BE347078.1|BE347078
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|7640038|gb|AW734347.1|AW734347
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|26268981|gb|CA820044.1|CA820044
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|21889394|gb|BQ742607.1|BQ742607
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|22522526|gb|BU081337.1|BU081337
EST:     GTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: GTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|254331711|gb|GR843561.1|GR843561
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|15286256|gb|BI470147.1|BI470147
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAACTCAATTAAGGAGGAAAT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAAT
EST: gi|15814229|gb|BI786504.1|BI786504
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|22525578|gb|BU084389.1|BU084389
EST:     TAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: TAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|10846169|gb|BF069133.1|BF069133
EST:     CTCATACTGTATAACTGAAGAGGGTACGCCCGTGAAT-CAATGCTAACAA                         GATCTCCGATGGA-GAGTATGTTAAGTC
genomic: CTCAGACTGTAGAACTGAGGAGGGTACGCC-GTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGA-GGAAGAGTATGTAAAGTC
EST: gi|15286907|gb|BI470798.1|BI470798
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|26048073|gb|CA784670.1|CA784670
EST:     CCTCAGACTGTAGAAGTGAGGAGGGTACGCCGTGTATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|7588477|gb|AW704334.1|AW704334
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|13252819|gb|BG363722.1|BG363722
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|6502045|gb|AW203418.1|AW203418
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGG
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGG
EST: gi|8283323|gb|BE020884.1|BE020884
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|9820119|gb|BE555629.1|BE555629
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|26057207|gb|CA800121.1|CA800121
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTANAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
EST: gi|13477481|gb|BG507350.1|BG507350
EST:     CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAA                         GATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT
genomic: CCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgc ... ttttcttcagGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAgtgagaatgctgagactgctgatctctgccttgttttcattgatcatgtgcctttcttttactgatcattatgctgttttcttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG