1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ACAAGTGCATCTTTGAAATTCACAGTATTAAACCCAATGGGCCGAATTTGGACAATGGTTGCTGGGGGAGGTGCTAGTGTTATCTATGCTGATACGgtgtgtttctattactttaaaagttaaattccttgctaatttccaatctcttgtaacattaagcaatacacttcttacatactaatttattaaaacag
species | Glycine max |
transcript | GLYMA15G42140.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTATCTATGCTGATACG GTAGGAGATCTTGGTTATGCTCCTGAGCTTGGAAACTATGCAGAATATAGTEST: gi|6502280|gb|AW203653.1|AW203653
genomic: GTTATCTATGCTGATACGgtgtgtttct ... attaaaacagGTAGGAGATCTTGGTTATGCTCCTGAGCTTGGAAACTATGCAGAATATAGT
EST: TTTGGACAATGGTTGCTGGGGGAGGTGCTAGTGTTATCTATGCTGATACG GTAGGAGATCTTGGTTATGCTCCTGAGCTTGGAAACTATGCAGAATATAGTEST: gi|192330363|gb|FK021164.1|FK021164
genomic: TTTGGACAATGGTTGCTGGGGGAGGTGCTAGTGTTATCTATGCTGATACGgtgtgtttct ... attaaaacagGTAGGAGATCTTGGTTATGCTCCTGAGCTTGGAAACTATGCAGAATATAGT
EST: GGTGCTAGTGTTATCTATGCTGATACG GTAGGAGATCTTGGTTATGCT-CTGAGCTTGGAAACTATGCAGAATATAGT
genomic: GGTGCTAGTGTTATCTATGCTGATACGgtgtgtttct ... attaaaacagGTAGGAGATCTTGGTTATGCTCCTGAGCTTGGAAACTATGCAGAATATAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGTGCATCTTTGAAATTCACAGTATTAAACCCAATGGGCCGAATTTGGACAATGGTTGCTGGGGGAGGTGCTAGTGTTATCTATGCTGATACGgtgtgtttctattactttaaaagttaaattccttgctaatttccaatctcttgtaacattaagcaatacacttcttacatactaatttattaaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT