1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattcatgtctacttgttggttcctctgctcctctgtaatgtagctcaagtgcttaactaatatgcatggttgtacgtgataaactaaggctatg...
species | Glycine max |
transcript | GLYMA15G41570.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGCTTTTGGCTGGGCAAAAGAGAAG GGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTAEST: gi|18730394|gb|BM525852.1|BM525852
genomic: TGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattc ... atttttgcagGGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTA
EST: TATAACTTTGCTTTTGGCTGGGCAAAAGAGAAG GGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTAEST: gi|26057708|gb|CA800622.1|CA800622
genomic: TATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattc ... atttttgcagGGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTA
EST: AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAG GGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTAEST: gi|213615205|gb|DB965013.1|DB965013
genomic: AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattc ... atttttgcagGGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTA
EST: AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAG GGTCAAAAATCTCTTGCATTEST: gi|6666545|gb|AW278012.1|AW278012
genomic: AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattc ... atttttgcagGGTCAAAAATCTCTTGCATT
EST: GAAATTCCGCGAGATATATAANCTT-GCTTTTGGCTGGGCAAAAGAGAAG GGGTCAAAA-TCTCTGGCATGGGATACAGCTATTGGTATGTGGCAATTATT
genomic: GAAATTCCGCGAGATATATAA-CTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattc ... atttttgcagGG-TCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAATTCCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGgtttgcattcatgtctacttgttggttcctctgctcctctgtaatgtagctcaagtgcttaactaatatgcatggttgtacgtgataaactaaggctatg
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