1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGAGAAATGTCGATTATGGGGTAAGCTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacattttgcttgagatttttgtgtcttcctctctttactgctgtctttatgcatgtgccataaatcagattgcttctgcagtgatctttaaata...
species | Glycine max |
transcript | GLYMA15G23150.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGAEST: gi|58023979|gb|CX710720.1|CX710720
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGAEST: gi|15815000|gb|BI787275.1|BI787275
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATEST: gi|254332819|gb|GR850069.1|GR850069
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAAT
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGAEST: gi|6914968|gb|AW396498.1|AW396498
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAAGAATGAGGTAATTGCATTGACGAACCTTCCTAATCGAEST: gi|58024165|gb|CX710906.1|CX710906
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGAEST: gi|57575810|gb|CX548781.1|CX548781
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
EST: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACA CTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
genomic: CATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacat ... gatctttcagCTGCAGCTGCAAAGGAATGAGGTAATTGCATTGACGAACCTTCTTAATCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGAAATGTCGATTATGGGGTAAGCTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCGAGTCATACAgtaagtacattttgcttgagatttttgtgtcttcctctctttactgctgtctttatgcatgtgccataaatcagattgcttctgcagtgatctttaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttcctc