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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCATATCTGCTATGGCTTGGGGAACAGAAACTTGTCCAAAGgtggctagcttctcatttaacccatcttttttgtttgcctctctatttatatttgatggattcagctttatttcttattttttattttctctctattagt...

Basic information

species Glycine max
transcript GLYMA15G13910.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12772188|gb|BG237115.1|BG237115
EST:     GCCATATCTGCTAT-GCTTGGGGAACAGAAACTTGTCCAAAG                         GTTGAAAAGATTTTTGGCCCTGGAAACCAATATGTCACTGCTGCAAAAATG
genomic: GCCATATCTGCTATGGCTTGGGGAACAGAAACTTGTCCAAAGgtggctagct ... aaacttgtagGTTGAAAAGATTTTTGGCCCTGGAAACCAATATGTCACTGCTGCAAAAATG
EST: gi|254340468|gb|GR850770.1|GR850770
EST:     GCCATATCTGCTATGGCTTGGGGAACAGAAACTTGTCCAAAG                         GTTGAAAAGATTTTTGGCCCTGGAAACCAATATGTCACTGCTGCAAAAATG
genomic: GCCATATCTGCTATGGCTTGGGGAACAGAAACTTGTCCAAAGgtggctagct ... aaacttgtagGTTGAAAAGATTTTTGGCCCTGGAAACCAATATGTCACTGCTGCAAAAATG