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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCAGATCTATATCCCTGTGATAAACTGGTTCCTCTTGGCTCTTTCTCTGGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATGgtaatgaatttatttcaatttatttttagtcctgcagataattggtaaaacttatcagccatgtttacgtaagatagtcaaattgaaacttggtgataat...

Basic information

species Glycine max
transcript GLYMA15G05880.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254334764|gb|GR844549.1|GR844549
EST:     GGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATG                         GCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTG
genomic: GGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATGgtaatgaatt ... cccctttcagGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTG
EST: gi|23731927|gb|BU764111.1|BU764111
EST:     GGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATG                         GCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAA
genomic: GGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATGgtaatgaatt ... cccctttcagGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAA