1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GCATTGCAAAGACCCTAACACCCAGCAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAGgtaaatctattatgattacttatagtttggacttttcaatgccacaattgtgaaaggtacttatggtttgggtttacttttggttgggtatcctaacaat...
species | Glycine max |
transcript | GLYMA15G04060.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAG CATGTACTTGAGCATGGGAAACCTCATGAGCGATCCGCCATTATCAAGGAAEST: gi|14205439|gb|BG839117.1|BG839117
genomic: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAGgtaaatctat ... taaataacagCATGTACTTGAGCATGGGAAACCTCATGAGCGATCCGCCATTATCAAGGAA
EST: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAG CATGTACTTGAGCATGGGAAACCTCATGAGCGATCCGCCATTATCAAGGAAEST: gi|51335348|gb|CO979214.1|CO979214
genomic: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAGgtaaatctat ... taaataacagCATGTACTTGAGCATGGGAAACCTCATGAGCGATCCGCCATTATCAAGGAA
EST: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAG CATGTACTTGAGCATGGGAAANNNCATGAGCGATCCGCCATTATCAAGGAA
genomic: GAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAGgtaaatctat ... taaataacagCATGTACTTGAGCATGGGAAACCTCATGAGCGATCCGCCATTATCAAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATTGCAAAGACCCTAACACCCAGCAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTAGCCCAGGATCAGTATGGCAATTATGTTGTCCAGgtaaatctattatgattacttatagtttggacttttcaatgccacaattgtgaaaggtacttatggtttgggtttacttttggttgggtatcctaacaat
- - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG