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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCATCTACTATGGAAGCGGAGTAAGCCTCCCAAGTTTCCCACTAGATATAACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGgtatttttttaactgatactttcttgtgttgctagtttatgttcctaatctttctttatagtggaaaatgtgctgcattttccccctttttacaatcatt...

Basic information

species Glycine max
transcript GLYMA14G33410.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8402756|gb|BE058390.1|BE058390
EST:     ACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAG                         GAAAAGCTGCCACCTACCGATTCCAGGTTAAGACCAGATCAAAGGCATTTG
genomic: ACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGgtattttttt ... gcatacgtagGAAAAGCTGCCACCTACCGATTCCAGGTTAAGACCAGATCAAAGGCATTTG
EST: gi|192319218|gb|FK009130.1|FK009130
EST:     ACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAG                         GAAAAGCTGCCACCCACCGATTCCAGGTTAAGACCAGATCAAAGGCATTTG
genomic: ACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGgtattttttt ... gcatacgtagGAAAAGCTGCCACCTACCGATTCCAGGTTAAGACCAGATCAAAGGCATTTG