1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGGAAGAAATTCTTTCAGTTCTTGATATTCCCCAAGGAAAGATGGGACTTGTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataatttgtctctctcccttggtttagtaaatacatgcttttttttggtatatcagtgaataatttaatccattgttccattgtctgttttaattttcaaatgtgtttgttggttcag
species | Glycine max |
transcript | GLYMA14G10520.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAA TGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAGEST: gi|193632285|gb|FK581869.1|FK581869
genomic: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataattt ... gttggttcagTGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
EST: GTCAATTAAGCGGTCTTTGCAA TGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAGEST: gi|193581283|gb|FK535510.1|FK535510
genomic: GTCAATTAAGCGGTC-TTGCAAgtaataattt ... gttggttcagTGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
EST: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAA TGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAGEST: gi|10843821|gb|BF067074.1|BF067074
genomic: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataattt ... gttggttcagTGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
EST: GTTATTGCGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAA TGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAGEST: gi|15287707|gb|BI471598.1|BI471598
genomic: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataattt ... gttggttcagTGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
EST: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAA TGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
genomic: GTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataattt ... gttggttcagTGCCGAAATTCTCACGGGAGGTCCCAAGGGCCCACCTGACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGAAGAAATTCTTTCAGTTCTTGATATTCCCCAAGGAAAGATGGGACTTGTTATTGGGAAAAGAGGGGCAACAATTTTGTCAATTAAGCGGTCTTGCAAgtaataatttgtctctctcccttggtttagtaaatacatgcttttttttggtatatcagtgaataatttaatccattgttccattgtctgttttaattttcaaatgtgtttgttggttcag
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