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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGAGAACAGGTATAATGCAAGCAGAGGTGCACACATAAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAGgtatttgttaaatgagattacaatcaccatcagatactgttattattaattcaatctgctggcagtgtaatcaaaacaagatgatgccacattattggaataattttgtttctgttggtgaaaatgcag

Basic information

species Glycine max
transcript GLYMA14G02180.4
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193723037|gb|FK656731.1|FK656731
EST:     AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAG                         CTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATG
genomic: AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAGgtatttgtta ... gaaaatgcagCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATG
EST: gi|38193636|gb|CF922842.1|CF922842
EST:     AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAG                         CTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATG
genomic: AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAGgtatttgtta ... gaaaatgcagCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATG
EST: gi|192314484|gb|FK008426.1|FK008426
EST:     AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAGAAT-CCAG                         CTTTGGT-GATACATGGGT-GCTAAA-CTCGTGCATGG
genomic: AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAGgtatttgtta ... gaaaatgcagCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGG
EST: gi|9258416|gb|BE346563.1|BE346563
EST:     AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAN                         CTTTGGTTGATACATTGGTTGCTAAAACT
genomic: AAACCTCAAACGTGCAGAGAAAGCACGGATATTGGTCAACAAAATTCCAGgtatttgtta ... gaaaatgcagCTTTGGTTGATACATTGGTTGCTAAAACT