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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTGTAAAAGTGAAAATTGCCACCCTTGCAAAAGGAACGTATGTGAAGCTGCAGCCTCACACAAAGGATTTTTTTGGATATCTCCAATCCAAAAGCCATgttagtatttcttctataatatctagttacacctttgacagtgtcaattgatattttctttcattctcttgattatttgcagcttagag

Basic information

species Glycine max
transcript GLYMA13G41280.1
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G41280.1 (Glycine max), 5'ss of exon 8
lower sequence: AT2G29070.2 (Arabidopsis thaliana), 5'ss of exon 6
-CATTGTAAAAGTGAAAATTGCCACCCTTGCAAAAGGAACGTATGTGAAGCTGCAGCCTCACACAAAGGATTTTTTTGGATATCTCCAATCCAAAAGCCATgttagtatttcttctataatatc-tagttacacctttgacagtgtcaattgatattttctttcattctcttgattatttgcagcttagag
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ACGTTATGCAAGTTAAGAATATCAGCTTGGTAAAAGGGACTTACATCAAGCTGCAGCCTCACACTCAAGATTTCTT-GGATATTTCCAACCCAAAAGCCATgtttgtagttttgaaactgaatagttttcgttctattgaatatggttttgaagaatgtgtttcttatcattcctcttttgcag-------