1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGGATGATGATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCAGATTGCGAGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGgtatggtttctttaatattatatcattttcaacatcacagtggtccagctatcccatttttatgtttgaaccttgcacctccaaattcattatcacttct...
species | Glycine max |
transcript | GLYMA13G20980.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CGAGCTGCTGTGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAG ACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCCEST: gi|193441463|gb|FK405062.1|FK405062
genomic: CGAGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGgtatggtttc ... tgttatgcagACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCC
EST: TGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAG ACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCC
genomic: TGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGgtatggtttc ... tgttatgcagACTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGATGATGATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCAGATTGCGAGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGgtatggtttctttaatattatatcattttcaacatcacagtggtccagctatcccatttttatgtttgaaccttgcacctccaaattcattatcacttct
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacctcc