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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATATGATGTCAATCCCATGGCAGTAGGAATTGATGTCAAGAAGCAGACAAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATGgtatgtgttttaaatcttctcatcttttatgtacttttcttttttctttccatgtctgtttctattctaacatcttctacag

Basic information

species Glycine max
transcript GLYMA13G19910.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193353296|gb|FK318504.1|FK318504
EST:     ATGATCTATACAATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATG                         TTAGGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT
genomic: ATGATCTAT-C-ATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATGgtatgtgttt ... tcttctacagTTAGGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT
EST: gi|193359677|gb|FK323761.1|FK323761
EST:     AAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATG                         TTAGGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT
genomic: AAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATGgtatgtgttt ... tcttctacagTTAGGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT
EST: gi|209729062|gb|BW651787.1|BW651787
EST:     AAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATA--                         -T-GGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT
genomic: AAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATGgtatgtgttt ... tcttctacagTTAGGTAGGGCAAATTTGGAGTGAAGACTGAGGTTTTTCTCGGCCAGCAGT