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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGGCACTTTTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGGgtaattcctgtgttgtgatttaattttactttcaatttgtataattggcatgcaatcatgttaaggaattcgcattttttttacgtgtgattattatatg...

Basic information

species Glycine max
transcript GLYMA13G19450.2
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209727148|gb|BW655213.1|BW655213
EST:     TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGG                         GGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAG
genomic: TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGGgtaattcctg ... ttgcattcagGGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAG
EST: gi|16281999|gb|BI944782.1|BI944782
EST:     TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGG                         GGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAGCAAGAG
genomic: TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGGgtaattcctg ... ttgcattcagGGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAGCAAGAG
EST: gi|192294186|gb|FG986275.1|FG986275
EST:     TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGG                         GGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAGCAAGAG
genomic: TTGAACTCACTTCCCACTCTAGTAAATTCACTGTCATCTTCAGTTGAGGGgtaattcctg ... ttgcattcagGGCAGATTCTGCAGCTGTGGCAATCACCACTACAGATCTTGTTAGCAAGAG