1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGTGGCTGCTGATGCTAAGTTGAATTTTGACGATAATGCTGCATATCGCCAGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttatttcttattttgtttgtgttttaccttacttaggaatggagcatatgatccctatacccattccatctttgccacctgagcctgggggggggggg...
species | Glycine max |
transcript | GLYMA13G18730.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATAEST: gi|13312096|gb|BG405747.1|BG405747
genomic: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttatttct ... ctttgaacagGTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATA
EST: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATAEST: gi|207779953|gb|GD753974.1|GD753974
genomic: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttatttct ... ctttgaacagGTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATA
EST: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAG GTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATA
genomic: AGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttatttct ... ctttgaacagGTGACTGCTGCAAAGGCAGACTTAAATTATATTGGGTTAGATGGAGAAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGCTGCTGATGCTAAGTTGAATTTTGACGATAATGCTGCATATCGCCAGAAAGAGATATTTGCTCTCCGTGATACAACACAAGAGGACCCTCGAGAGgtttatttcttattttgtttgtgttttaccttacttaggaatggagcatatgatccctatacccattccatctttgccacctgagcctgggggggggggg
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggggg